Wagner2018_Chordin_Cas9_Mutagenesis is not reproducible
VPetukhov opened this issue · 2 comments
VPetukhov commented
Hi, thank you for the interesting package! I'm trying to reproduce the Wagner2018_Chordin_Cas9_Mutagenesis notebook, but it doesn't work in multiple places: some variables are used before they're defined, some names does not match (e.g. somewhere sample_label
is called sample_labels
, which crashes the code), and some variables are just note defined (particularly, "RES" column in the metadata
). Also, the table of content does not match to the current headings. Could you please fix the thing? :)
dburkhardt commented
Hi, sorry about this. It looks like I just forgot to merge the updated notebook into the master branch. I should be able to finish the PR shortly. Thanks for bringing this to my attention!
VPetukhov commented
Thanks!