KrishnaswamyLab/MELD

Issues

• Can MELD be applied to time series data? Is this an appropriate approach?

  #68 opened 4 months ago by eL-Gene
  0

• Tutorial for running MELD on >2 treatment conditions

  #46 opened 4 years ago by mdmanurung
  5

• Robustness of MELD with small datasets

  #67 opened a year ago by Rumengol
  0

• Normalization suggestion

  #66 opened a year ago by paolabc
  0

• Problem with pip installation

  #62 opened a year ago by ShambaMondal
  11

• Synthetic Ground Truth Datasets

  #57 opened 3 years ago by DonyorM
  1

• About simulation data

  #58 opened 3 years ago by mugpeng
  1

• How to integrate sample likelihoods from different replicates

  #65 opened 2 years ago by nickhir
  0

• What to do with unmatched control samples

  #61 opened 2 years ago by nickhir
  2

• Error using the VFC algorithm for clustering analysis

  #55 opened 3 years ago by GabrielBaldissera
  3

• Get aData object to process MELD graph parameters

  #51 opened 2 years ago by Baboon61
  2

• UMAP instead of PHATE embedding

  #59 opened 2 years ago by michallipinski
  1

• tutorial links do not work

  #64 opened 2 years ago by nickhir
  0

• Treatment/Control Pairing

  #60 opened 2 years ago by paulstumpges
  2

• Can we use MELD on single replicate

  #56 opened 3 years ago by Rohit-Satyam
  8

• batch correction

  #50 opened 4 years ago by JBreunig
  8

• NameError: name 'curr_mse' is not defined

  #54 opened 3 years ago by RinconFer
  2

• `pip install meld` install `sklearn` instead of `scikit-learn`

  #53 opened 3 years ago by scottgigante-immunai
  1

• Using graph from Scanpy

  #52 opened 3 years ago by Hrovatin
  6

• Updating VFC operator

  #36 opened 4 years ago by dburkhardt
  0

• Unnecessary type restriction

  #22 opened 4 years ago by scottgigante
  0

• VFC doesn't work with >1D RES

  #23 opened 4 years ago by scottgigante
  1

• can't find get_cmap function

  #42 opened 4 years ago by wupeng2
  3

• Wagner2018_Chordin_Cas9_Mutagenesis is not reproducible

  #40 opened 4 years ago by VPetukhov
  2

• VertexFrequencyCluster and MELD API inconsistent

  #20 opened 6 years ago by scottgigante
  1

• VertexFrequencyCluster `fit_predict` docstring is misleading

  #19 opened 6 years ago by scottgigante
  1