KristinaUlicna
Research Scientist 👩💻 👩🔬 Valence Labs @recursionpharma 🧪 🖥️ | AI for Comp Biology 🔬 🧬
@recursionpharmaLondon, UK
Pinned Repositories
BayesianTracker
Bayesian multi-object tracking
CellComp
Python Scripts to my Cell Competition project contribution. Looking at pure WT cell populations to identify patterns of CSC.
CellTracking
Cell tracking using TensorFlow and BayesianTracker
cellx-predict
Explainable AI model of cell behavior
DeepTree
Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.
KristinaUlicna
Welcome to my GitHub profile 👋 full of #DeepLearning #SingleCell #DataScience repositories 👩💻 from my #PhD #research #project 👩🔬 & beyond!
kristinaulicna.github.io
NanoPush
Python Scripts to my PhD rotation project, contributing to development of machine learning-based single-step DNA methylation caller 'NanoPush'.
sequitr
Microscopy image processing with TensorFlow
unet_segmentation_metrics
Metrics for determining segmentation accuracy
KristinaUlicna's Repositories
KristinaUlicna/DeepTree
Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.
KristinaUlicna/CellComp
Python Scripts to my Cell Competition project contribution. Looking at pure WT cell populations to identify patterns of CSC.
KristinaUlicna/KristinaUlicna
Welcome to my GitHub profile 👋 full of #DeepLearning #SingleCell #DataScience repositories 👩💻 from my #PhD #research #project 👩🔬 & beyond!
KristinaUlicna/BayesianTracker
Bayesian multi-object tracking
KristinaUlicna/CellTracking
Cell tracking using TensorFlow and BayesianTracker
KristinaUlicna/unet_segmentation_metrics
Metrics for determining segmentation accuracy
KristinaUlicna/cellx-predict
Explainable AI model of cell behavior
KristinaUlicna/kristinaulicna.github.io
KristinaUlicna/NanoPush
Python Scripts to my PhD rotation project, contributing to development of machine learning-based single-step DNA methylation caller 'NanoPush'.
KristinaUlicna/sequitr
Microscopy image processing with TensorFlow
KristinaUlicna/cnn-annotator
Annotate microscopy images for CNN classifier
KristinaUlicna/Deep-Learning-Book-Chapter-Summaries
Attempting to make the Deep Learning Book easier to understand.
KristinaUlicna/emoji-cheat-sheet
A markdown version emoji cheat sheet
KristinaUlicna/arboretum
Track and lineage visualization with btrack and Napari
KristinaUlicna/BIOC0016-MachineLearning
BIOC0016 Machine Learning practical
KristinaUlicna/cellx
DL/ML tools for CellX project
KristinaUlicna/HPA-Cell-Segmentation
KristinaUlicna/Molecules
KristinaUlicna/napari-btrack
Napari plugin for btrack
KristinaUlicna/octopuslite-reader
reader for octopuslite data