KyleStiers
Data Scientist. Biochemistry PhD. Interested in structural biology, genomics, automation, tinkering, and making.
@bayer-int Columbia, Missouri
Pinned Repositories
3030_Haribo_Edition
Aluminum extrusion conversion for the Original Prusa i3 MK2
bevy-3dsandbox
Heat-Stress-App
Mizzou Animal Science Heat Stress App
hyena-dna
Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena
KyleStiers.github.io
mmtf-fragment-search
Search similar fragments across the PDB using MMTF
mmtf-hackathon-2018
Hackathon projects repository for MMTF Workshop 2018
mmtf-spark
Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
mmtf-workshop-2017
Structural Bioinformatics Training Workshop & Hackathon 2017
Science_scripts
Various shell/python/R scripts I've written over the course of my PhD for various reasons
KyleStiers's Repositories
KyleStiers/mmtf-fragment-search
Search similar fragments across the PDB using MMTF
KyleStiers/Science_scripts
Various shell/python/R scripts I've written over the course of my PhD for various reasons
KyleStiers/3030_Haribo_Edition
Aluminum extrusion conversion for the Original Prusa i3 MK2
KyleStiers/bevy-3dsandbox
KyleStiers/Heat-Stress-App
Mizzou Animal Science Heat Stress App
KyleStiers/hyena-dna
Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena
KyleStiers/KyleStiers.github.io
KyleStiers/mmtf-hackathon-2018
Hackathon projects repository for MMTF Workshop 2018
KyleStiers/mmtf-spark
Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
KyleStiers/mmtf-workshop-2017
Structural Bioinformatics Training Workshop & Hackathon 2017
KyleStiers/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
KyleStiers/variant-calling-pipeline-gatk4
Variant Calling Pipeline Using GATK4 and Nextflow
KyleStiers/ngl-vr
KyleStiers/noobomics
A very quick and unsophisticated approach to exploring RNAseq and Proteomic data to distill out hypothesis-driven candidates.
KyleStiers/rora
Right once, run anywhere
KyleStiers/rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
KyleStiers/TSAapp
Tool for parsing QS3 instrument data into a reasonable matrix and webserver code