Pinned Repositories
OutcomesApp
App to populate "Outcomes" section of "Characteristics of included studies" table in ReviewManager5 file. This app creates a copy of the review - the original file remains untouched.
RAPTOR
RAPTOR is a proof of concept, which shows that all data can be extracted from ReviewManager files. Partly, it also shows that these data can be cleaned. Its output is a XML file which can be queried e.g. in Excel.
SEED
SEED is an application that reads ReviewManagers XML-files and places part of their content into wiki-markup. For downloading please follow the link in the readme-file or click on the "release" tab below.
HealthINF2020
Code and supplementary material for the HealthINF conference paper
LSR_Automation
This repository contains an evidence surveillance pipeline for our living review: Data extraction methods for systematic review (semi)automation: A living review
LSTM-PICO-Detection
Code for LSTM based model for PICO element detection
meerkatApp
Web app user interface for Meerkat and RAPTOR data
SR_automation_LSR
Repo containing files/code/backups of living review
SRtoCSV
to save spreadsheets of data extracted from systematic reviews as CSV files
SystematicSearcher
This repository contains a python package to help conducting systematic searches on databases that do not provide advanced search interfaces. An implementation for the "DBLP" and "arXiv" databases is already included.
L-ENA's Repositories
L-ENA/HealthINF2020
Code and supplementary material for the HealthINF conference paper
L-ENA/LSR_Automation
This repository contains an evidence surveillance pipeline for our living review: Data extraction methods for systematic review (semi)automation: A living review
L-ENA/LSTM-PICO-Detection
Code for LSTM based model for PICO element detection
L-ENA/SR_automation_LSR
Repo containing files/code/backups of living review
L-ENA/SRtoCSV
to save spreadsheets of data extracted from systematic reviews as CSV files
L-ENA/SystematicSearcher
This repository contains a python package to help conducting systematic searches on databases that do not provide advanced search interfaces. An implementation for the "DBLP" and "arXiv" databases is already included.
L-ENA/BERT-Master
Code for finetuning BERT
L-ENA/bertviz
Tool for visualizing attention in the Transformer model (BERT, GPT-2, XLNet, and RoBERTa)
L-ENA/meerkatApp
Web app user interface for Meerkat and RAPTOR data
L-ENA/CheckersAI
Java assignment
L-ENA/classifiers
L-ENA/colab
L-ENA/CORD19scripts
some scripys for the CORD-19 NLP challenge
L-ENA/COVID_suicide_living
L-ENA/ES-hackathon-GPT-evaluation
L-ENA/EvaluationSynthesisMethods
Code to help analysis and synthesis of Evaluation Reports
L-ENA/helper_scripts
L-ENA/living_review_data_extraction
L-ENA/meerkatAPI
API to search meerkat online
L-ENA/misc_data
L-ENA/Outcomes
Working version of the OutcomesApp, for release see @CochraneSchizophrenia
L-ENA/PhDApps
Public deployment of some PhD outputs via Streamlit app
L-ENA/PubMed-PICO-Detection
PubMed PICO Element Detection Dataset
L-ENA/R_RIS
Converts data from a spreadsheet into RIS
L-ENA/RAPTOR
L-ENA/SpyGame
SpyGame for programming project
L-ENA/streamlit-example
Example Streamlit app that you can fork to test out share.streamlit.io
L-ENA/ThesisCode
Working version of RAPTOR, for release see @CochraneSchizophrenia
L-ENA/transformers
🤗 Transformers: State-of-the-art Natural Language Processing for TensorFlow 2.0 and PyTorch.