Laboratory of Experimental Biophysics - EPFL

Lausanne, Switzerland

Pinned Repositories

ALICA
Automated Laser Illumination Control Algorithms
Language:Java5 5 143
DEFCoN
Single molecule density estimation by fully convolutional neural networks
Language:Python11 4 01
EDA
Tools for adaptive imaging in the LEB-EPFL
Language:Jupyter Notebook3 2 01
eda-napari
event-driven-acquisition plugin for napari
Language:Python1 3 271
eda_plugin
Plugin for event-driven acquisition to be used with Micro-Manager
Language:Python3 2 01
MitoSplit-Net
Detection of mitochondrial divisions with neural networks
Language:Jupyter Notebook2 4 110
mm-docker
Dockerfiles for building Micro-Manager components.
Language:Shell2 4 10
ptycho
Hardware control and image analysis code for Fourier ptychography.
Language:Jupyter Notebook2 1 00
SASS
Toolkit for simulating real-time control systems for super-resolution microscopy.
Language:Java7 7 384
WGmode
2D simulation functions for slab and ridge waveguide mode study
Language:MATLAB4 7 03

Laboratory of Experimental Biophysics - EPFL's Repositories

LEB-EPFL/DEFCoN
Single molecule density estimation by fully convolutional neural networks
Language:Python11 4 01
LEB-EPFL/SASS
Toolkit for simulating real-time control systems for super-resolution microscopy.
Language:Java7 7 384
LEB-EPFL/ALICA
Automated Laser Illumination Control Algorithms
Language:Java5 5 143
LEB-EPFL/WGmode
2D simulation functions for slab and ridge waveguide mode study
Language:MATLAB4 7 03
LEB-EPFL/EDA
Tools for adaptive imaging in the LEB-EPFL
Language:Jupyter Notebook3 2 01
LEB-EPFL/eda_plugin
Plugin for event-driven acquisition to be used with Micro-Manager
Language:Python3 2 01
LEB-EPFL/DEFCoN-ImageJ
An ImageJ plugin for DEFCoN, the fluorescence spot counter based on fully convolutional neural networks.
Language:Java2 4 20
LEB-EPFL/MitoSplit-Net
Detection of mitochondrial divisions with neural networks
Language:Jupyter Notebook2 4 110
LEB-EPFL/MitoWorks
Collection of MATLAB functions for analysis of mitochondrial shape and dynamics.
Language:Matlab2 4 00
LEB-EPFL/mm-docker
Dockerfiles for building Micro-Manager components.
Language:Shell2 4 10
LEB-EPFL/project_layout
Language:Python2 1 00
LEB-EPFL/ptycho
Hardware control and image analysis code for Fourier ptychography.
Language:Jupyter Notebook2 1 00
LEB-EPFL/eda-napari
event-driven-acquisition plugin for napari
Language:Python1 3 271
LEB-EPFL/fifi_parts_list
The parts list for FIFI, the flat-field illuminator for large field of view localization microscopy.
1 3 0
LEB-EPFL/sDaDa
Shape Dynamics Automated Data Analysis
Language:Matlab1 4 02
LEB-EPFL/tracking-and-diffusion
Language:Python1 3 0
LEB-EPFL/python-isim-control
Python Control Interface for the iSIM at LEB-EPFL
Language:Python0 2 10
LEB-EPFL/ALICA_ACPack
Analyzer and controller implementations for ALICA.
Language:Java3 0
LEB-EPFL/ALICA_interfaces
Interfaces to the primary components of ALICA.
Language:Java3 0
LEB-EPFL/deep-events
Scripts and notebooks for annotation and handling of phase and fluorescent data for preparation and training of neural networks for event detection.
Language:Python2 2
LEB-EPFL/ImageInjector
A simple plugin for injecting images into Micro-Manager's demo camera.
Language:Java3 0
LEB-EPFL/imajin
Tools to simulate optics and microscopy experiments.
Language:Python1 0
LEB-EPFL/iSIM
iSIM control and analysis software
Language:Python1 391
LEB-EPFL/kpal
Hardware control for experimental science
Language:Python1 0
LEB-EPFL/led-array-datasets
1 0
LEB-EPFL/napari-eda-highlight-reel
Language:Python1 4
LEB-EPFL/pymm-eventserver
Event Server to receive Micro-Manager events in python via zeromq
Language:Java1 0
LEB-EPFL/rats
High performance probabilistic state machine simulator
Language:Rust1 0
LEB-EPFL/StormChaser
DEMO 3D Double-Helix localization software
4 0
LEB-EPFL/Zeiss-microscope
This is a wiki page for the labs Zeiss Axio Observer 7 microscope
Language:Python2 6