Biosemantics group

LUMC, Leiden, The Netherlands

Pinned Repositories

beat-covid
FAIR data for COVID-19 research
Language:Jupyter Notebook2 2 04
cedar-to-fdp
Scripts to populate FDP with cedar instances
Language:Python1 1 00
dcat-extension
An attempt to extend dcat:Resource type to cover EJP-RD and EOSC-Life projects specific entities
1 2 10
ejprd-resource-metadata
This repository collects metadata information of resources used in the EJPRD. These metadata are further published in a FAIR Data Point.
1 0 00
ERN-common-data-elements
2 3 413
phenopackets-rdf-schema
RDF schema of phenopackets
8 4 75
Rare-Disease-Semantic-Model
1 4 01
RD-FAIRmetric-F4
RD-FAIRmetric-F4
Language:Python1 2 00
rett-variant
2 8 00
sample-sheets-phenopackets
Language:Python2 3 11

Biosemantics group's Repositories

LUMC-BioSemantics/phenopackets-rdf-schema
RDF schema of phenopackets
8 4 75
LUMC-BioSemantics/beat-covid
FAIR data for COVID-19 research
Language:Jupyter Notebook2 2 04
LUMC-BioSemantics/ERN-common-data-elements
2 3 413
LUMC-BioSemantics/rett-variant
2 8 00
LUMC-BioSemantics/sample-sheets-phenopackets
Language:Python2 3 11
LUMC-BioSemantics/cedar-to-fdp
Scripts to populate FDP with cedar instances
Language:Python1 1 00
LUMC-BioSemantics/dcat-extension
An attempt to extend dcat:Resource type to cover EJP-RD and EOSC-Life projects specific entities
1 2 10
LUMC-BioSemantics/EJP-RD-WP13-FDP-template
1 1 20
LUMC-BioSemantics/ejprd-resource-metadata
This repository collects metadata information of resources used in the EJPRD. These metadata are further published in a FAIR Data Point.
1 0 00
LUMC-BioSemantics/Rare-Disease-Semantic-Model
1 4 01
LUMC-BioSemantics/RD-FAIRmetric-F4
RD-FAIRmetric-F4
Language:Python1 2 00
LUMC-BioSemantics/beat-covid-RESTful-API
The SPARQL queries based on BeatCOVID semantic model for generating RESTful API with grlc
1 01
LUMC-BioSemantics/BYOD-leiden-2016
Language:Web Ontology Language2 0
LUMC-BioSemantics/BYOD-tools
Language:HTML2 01
LUMC-BioSemantics/crosslinkWGCNA
Language:Vue4 01
LUMC-BioSemantics/EJP-RD-WP13-FDP-grlc
2 0
LUMC-BioSemantics/EJP-RD-WP13-IBM-hackathon
2 01
LUMC-BioSemantics/EJPRD-archimate-diagrams
Archimate diagrams to describe EJPRD project components, service and use cases
1 0
LUMC-BioSemantics/ejprd-metadata-bioschema-mappings
This repository contains mappings of EJPRD metadata model and bioschema
1 01
LUMC-BioSemantics/EJPRD-QB-index
An API interface implemented on top of FDP index to server EJPRD query builder
Language:Java1 01
LUMC-BioSemantics/ejprd-wp13-metadata
This repository collects metadata information of resources used in WP13. These metadata are further published in WP13 FAIR Data Point.
1 04
LUMC-BioSemantics/EOSC-Life_demo
Language:Common Workflow Language1 0
LUMC-BioSemantics/FAIR-metrics-ontology
2 0
LUMC-BioSemantics/hello-world-disqover-plugin
Hello world DISQOVER plugin example
Language:Python1 0
LUMC-BioSemantics/RD-FAIRmetrics
1 12
LUMC-BioSemantics/ReferenceSequenceAnnotation
2 0
LUMC-BioSemantics/SWAT4HCLS-hackathon-2021-ejprd-grlc
This is a POC to create EJP-RD specific APIs from SPARQL queries by grlic
2 02
LUMC-BioSemantics/SWAT4HCLS-hackathon-2021-ejprd-salad
2 01
LUMC-BioSemantics/SWAT4HCLS-hackathon-2021-github-actions
This is a POC work to explore options to use github workflows to validate RDF modelers work
Language:Python2 08
LUMC-BioSemantics/w3id.org
Website source code for w3id.org
Language:HTML1 0