Pinned Repositories
AFM_Slicer
Collection of FIJI macros to slice and analyse AFM topography images into tomography-like stacks that can be read and interpreted with FIJI and other software. Here we further use FIJI to analyse porous AFM images.
CocciVol
Combining FIJI and ilastik to provide a versatile and adaptable approach to automated Bacteria cell classification and cell volume determination from fluorescence images . This powerful combination of FIJI and ilastik (CocciVol) applied to Cocci bacterial cells provides an automated method with higher throughput of calculating cell volume.
Git_lesson_RSE
This is an academic personal website
NanoparticlesFIJI
FIJI macro to segment and analyse automatically nanoparticles from EM micrographs.
Laia-Pasquina's Repositories
Laia-Pasquina/CocciVol
Combining FIJI and ilastik to provide a versatile and adaptable approach to automated Bacteria cell classification and cell volume determination from fluorescence images . This powerful combination of FIJI and ilastik (CocciVol) applied to Cocci bacterial cells provides an automated method with higher throughput of calculating cell volume.
Laia-Pasquina/AFM_Slicer
Collection of FIJI macros to slice and analyse AFM topography images into tomography-like stacks that can be read and interpreted with FIJI and other software. Here we further use FIJI to analyse porous AFM images.
Laia-Pasquina/NanoparticlesFIJI
FIJI macro to segment and analyse automatically nanoparticles from EM micrographs.
Laia-Pasquina/Git_lesson_RSE
This is an academic personal website