This GitHub repository contains lecture slides as well as the computing exercises for the 2019 Dragon Star Bioinformatics course. This is a five-day course with the theme "Genomics of Human Diseases". The content of the course is described below:
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Day 1
Genomic technologies in disease studies: Course slide, Computing exercise (in Chinese)
NGS data formats and variant calling: Course slide, Computing exercise
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Day 2
Alignment of short/long-read sequencing data: Course slide, Computing exercise
Genome assembly by short/long-read sequencing: Course slide, Computing exercise
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Day 3
Detection of structural variants in human diseases: Course slide, Computing exercise
Annotation and phenotype-driven interpretation of genetic variants: Course slide, Computing exercise 1 Computing exercise 2
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Day 4
SNP and Sequencing-based genome-wide association studies (GWAS): Course slide, Computing exercise
Rare variants and de novo variants association studies: Course slide, Computing exercise
Introduction to cloud computing in bioinformatics
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Day 5
RNA-Seq in human diseases: Course slide, Computing exercise
Deep Learning in sequencing data analysis: Course slide
Artificial intelligence and somatic variant analysis
Housekeeping issues and acknowledgements are given here.