UCSF Peder Larson Research Group
Software projects for imaging technology developed in Larson Group at UCSF
University of California - San Francisco
Pinned Repositories
dnlinv
Reconstruction code and reproducible reconstruction scripts for DNLINV paper
hyperpolarized-mri-toolbox
The goal of this toolbox is to provide open-source research-level and prototyping software tools for hyperpolarized MRI experiments. It is currently based on MATLAB/Octave code, and includes code for designing radiofrequency (RF) pulses, imaging gradients, data reconstruction, and data analysis. doi: 10.5281/zenodo.1198915
LarsonLab-swlist
Larson Lab Software List
LongT2-Suppression-Pulses
Long-T2 suppression RF pulses for MRI of short and ultrashort T2 components
MRI-education-resources
Resources for learning the principles of magnetic resonance imaging (MRI)
mripy
A python based MRI reconstruction toolbox with compressed sensing, parallel imaging and machine-learning functions
Radial-Field-of-Views
Radial sampling patterns in frequency space to support anisotropic field of views (FOVs) in the dual domain
Spectral-Spatial-RF-Pulse-Design
This package includes Matlab functions to design spectral-spatial RF pulses (also known as spatial-spectral RF pulses) for application to magnetic resonance spectroscopy and imaging
test_book
UTEMRI_Brain
Processing ultrashort echo time (UTE) MRI data in the Brain
UCSF Peder Larson Research Group's Repositories
LarsonLab/MRI-education-resources
Resources for learning the principles of magnetic resonance imaging (MRI)
LarsonLab/hyperpolarized-mri-toolbox
The goal of this toolbox is to provide open-source research-level and prototyping software tools for hyperpolarized MRI experiments. It is currently based on MATLAB/Octave code, and includes code for designing radiofrequency (RF) pulses, imaging gradients, data reconstruction, and data analysis. doi: 10.5281/zenodo.1198915
LarsonLab/Spectral-Spatial-RF-Pulse-Design
This package includes Matlab functions to design spectral-spatial RF pulses (also known as spatial-spectral RF pulses) for application to magnetic resonance spectroscopy and imaging
LarsonLab/Radial-Field-of-Views
Radial sampling patterns in frequency space to support anisotropic field of views (FOVs) in the dual domain
LarsonLab/mripy
A python based MRI reconstruction toolbox with compressed sensing, parallel imaging and machine-learning functions
LarsonLab/UTEMRI_Brain
Processing ultrashort echo time (UTE) MRI data in the Brain
LarsonLab/dnlinv
Reconstruction code and reproducible reconstruction scripts for DNLINV paper
LarsonLab/LarsonLab-swlist
Larson Lab Software List
LarsonLab/LongT2-Suppression-Pulses
Long-T2 suppression RF pulses for MRI of short and ultrashort T2 components
LarsonLab/test_book
LarsonLab/UTE-nipype
Primitive pipeline for imaging UTE MRI data using Nipype
LarsonLab/LarsonLab.github.io
Research group web site, with a focus on blog-style content
LarsonLab/UTE_Registration
Registration code for UTE data
LarsonLab/dworkLib
Useful utilities
LarsonLab/enlive
Calibrationless Parallel MRI with ENLIVE
LarsonLab/Flip-Angle-Design-Toolbox
Tools for designing optimal flip angle schemes for hyperpolarized carbon-13 MRI
LarsonLab/ilumr-courseware
Courseware for the ilumr educational MRI system
LarsonLab/SuperStimulatedEchoes
LarsonLab/UCSF_Xenograft_MRI_Segmentation
LarsonLab/UTE-signal-processing