Lattice Automation
We make software solutions that enable synthetic biology workflows, pipelines, and best practices.
Boston, MA
Pinned Repositories
aws-codepipeline-jenkins-aws-codedeploy_linux
Use this sample when creating a four-stage pipeline in AWS CodePipeline while following the Four Stage Pipeline Tutorial. http://docs.aws.amazon.com/codepipeline/latest/userguide/getting-started-4.html
constellation-js
Library for combinatorially specifying, constraining, and exploring genetic design spaces.
icor-codon-optimization
RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8
primers
A PCR primer tool for DNA assembly flows
repp
repository-based plasmid design
seqfold
nucleic acid folding
seqparse
Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format
seqviz
a JavaScript DNA, RNA, and protein sequence viewer
synbio
a DNA assembly library
Lattice Automation's Repositories
Lattice-Automation/seqviz
a JavaScript DNA, RNA, and protein sequence viewer
Lattice-Automation/seqfold
nucleic acid folding
Lattice-Automation/icor-codon-optimization
RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8
Lattice-Automation/repp
repository-based plasmid design
Lattice-Automation/primers
A PCR primer tool for DNA assembly flows
Lattice-Automation/synbio
a DNA assembly library
Lattice-Automation/seqparse
Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format
Lattice-Automation/constellation-js
Library for combinatorially specifying, constraining, and exploring genetic design spaces.
Lattice-Automation/aws-codepipeline-jenkins-aws-codedeploy_linux
Use this sample when creating a four-stage pipeline in AWS CodePipeline while following the Four Stage Pipeline Tutorial. http://docs.aws.amazon.com/codepipeline/latest/userguide/getting-started-4.html