gsMap (genetically informed spatial mapping of cells for complex traits)

1.Citation

Liyang Song, Wenhao Chen, Junren Hou, Minmin Guo, Jian Yang (2024) Spatially resolved mapping of cells associated with human complex traits. (Under review)

2.Installation

install use pip:

pip install gsMap

install from source:

git clone https://github.com/LeonSong1995/gsMap.git
cd gsMap
pip install -e .

3.Usage

Please checkout the documentations and tutorials at gsMap.docs.

4.Online visualization

To visualize the traits-embryo or traits-brain association spatial maps, please refer to gsmap.visualization.

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