LewisLabUCSD/CHO96

Code accompanying manuscript: "Deciphering the determinants of recombinant protein yield across the human secretome"

Expressing the human secretome in CHO

This repo contains the data and code to accompany Deciphering the determinants of recombinant protein yield across the human secretome by Masson et al.

This repository includes:

• Protein feature analysis and associated data ProteinFeatures
• Transcriptomic analysis of the 96 RNA-Seq samples and associated data CHO96_RNAseq

Datasets

The ML output are hosted at: https://www.kaggle.com/datasets/helenmasson/cho96proteinyieldmodeloutputs