LiamMacNeil
Ecosystem modelling group in marine evolutionary ecology.
GEOMAR Helmholtz Centre for Ocean Research KielKiel, Germany
Pinned Repositories
AZMP-NFLD-Shelf-Maps
Plotting 2019 AZMP sampling stations using open-access bathymetry data
Baltic_Demersal_HGAMs
Hierarchical Generalized Additive Models (HGAMs)
Bioregionalization
Bioregionalization of demersal fish across continental shelf seas
Holo-Plankton
Micro-mesoplankton groups imaged on the Newfoundland Shelf (Nov-Dec, 2019)
Holographic-Transfer-Learning
Classifying holographic plankton images with 4 pre-trained, state-of-the-art convolutional neural networks. Includes stratified k-fold cross validation, evaluation metrics, and plotting tools.
LiamMacNeil
Config files for my GitHub profile.
LiamMacNeil.github.io
Webpage
Mudsnail_Superpixels
Sizing mudsnails: applying superpixels to scale growth detection under ocean warming
normalization_pipeline
Basic compositional microbiome data analysis pipeline workflow
oce
R package for oceanographic processing
LiamMacNeil's Repositories
LiamMacNeil/Holographic-Transfer-Learning
Classifying holographic plankton images with 4 pre-trained, state-of-the-art convolutional neural networks. Includes stratified k-fold cross validation, evaluation metrics, and plotting tools.
LiamMacNeil/Holo-Plankton
Micro-mesoplankton groups imaged on the Newfoundland Shelf (Nov-Dec, 2019)
LiamMacNeil/AZMP-NFLD-Shelf-Maps
Plotting 2019 AZMP sampling stations using open-access bathymetry data
LiamMacNeil/Baltic_Demersal_HGAMs
Hierarchical Generalized Additive Models (HGAMs)
LiamMacNeil/Bioregionalization
Bioregionalization of demersal fish across continental shelf seas
LiamMacNeil/LiamMacNeil
Config files for my GitHub profile.
LiamMacNeil/LiamMacNeil.github.io
Webpage
LiamMacNeil/Mudsnail_Superpixels
Sizing mudsnails: applying superpixels to scale growth detection under ocean warming
LiamMacNeil/normalization_pipeline
Basic compositional microbiome data analysis pipeline workflow
LiamMacNeil/oce
R package for oceanographic processing