Pinned Repositories
BioVNN
Repository for *Using Interpretable Deep Learning to Model Cancer Dependencies*
Covariation-ET_raw_data
MSA and covariation results for CovET manuscript
EA_antibiotics_resistance
EAML
An EA-based pipeline for ranking disease risk genes through ensemble learning
EPIMUTESTR
GeneEMBED
EA Wavelet analysis implementation
multimodal-network-diffusion
Repository for *Multimodal Network Diffusion Predicts Future Disease-Gene-Chemical Associations*
nDiffusion
Network Diffusion (nDiffusion) to Validate Gene Connectedness
Raw_EA_bacteria
Raw EA scores by species
RNA_ET_ms
Code repository to accompany the manuscript *An Evolutionary Trace method defines functionally important bases and sites common to RNA families*
LichtargeLab's Repositories
LichtargeLab/multimodal-network-diffusion
Repository for *Multimodal Network Diffusion Predicts Future Disease-Gene-Chemical Associations*
LichtargeLab/EAML
An EA-based pipeline for ranking disease risk genes through ensemble learning
LichtargeLab/EPIMUTESTR
LichtargeLab/RNA_ET_ms
Code repository to accompany the manuscript *An Evolutionary Trace method defines functionally important bases and sites common to RNA families*
LichtargeLab/BioVNN
Repository for *Using Interpretable Deep Learning to Model Cancer Dependencies*
LichtargeLab/EA_antibiotics_resistance
LichtargeLab/Covariation-ET
A repository for python implementations of EvolutionaryTrace for single positions and for pairs of positions (covariation).
LichtargeLab/Covariation-ET_raw_data
MSA and covariation results for CovET manuscript
LichtargeLab/GeneEMBED
EA Wavelet analysis implementation
LichtargeLab/nDiffusion
Network Diffusion (nDiffusion) to Validate Gene Connectedness
LichtargeLab/Raw_EA_bacteria
Raw EA scores by species
LichtargeLab/ShinyBioHEAT
A shiny application that identifies the phenotype driving genes in evolved E. coli using Evolutionary Action.
LichtargeLab/iDEAL
Repository for Imputed Deviation of EA Load
LichtargeLab/Recurrent-High-Impact-Mutations-on-Class-A-GPCRs