LieberInstitute/VistoSeg

image requirements

skim245 opened this issue · 1 comments

Dear authors, thank you for developing VistoSeg.
I have a question about the input image requirements to run this tool.
Do we need the original image? or can we use the image from "SpaceRanger" in tissue_hires_image.png format?
if we could used the preprocessed (i.e. cropped images) can you guide me on steps to do so?
thank you in advance!

Hello,

Thanks for reaching out. We need the original image to process it through VistoSeg.
You can find the detailed steps here http://research.libd.org/VistoSeg/