Getting cropped spot images
ahmetrifaioglu opened this issue · 1 comments
ahmetrifaioglu commented
Dear VistoSeg team,
Thank you very much for this amazing tool!
I was wondering if it is possible to save the individual images of all spots (similar to the image here - just above section 4.2 http://research.libd.org/VistoSeg/step-4-gui-to-count-nuclei-in-a-visium-spot.html#spotspotcheck) given full resolution tiff image, scalefactors_json and tissue_positions_list.
ahmetrifaioglu commented
Closing the issue as I solved the problem.