LilithElina

LilithElina's Stars

• datacarpentry/python-ecology-lesson

  Data Analysis and Visualization in Python for Ecologists

  Language:Jupyter Notebook160310

• recharts/recharts

  Redefined chart library built with React and D3

  Language:TypeScript23.3k1.7k

• CJ-Chen/TBtools-II

  GUI/CommandLine Tool Box for biologistists to utilize NGS data.

  Language:Shell861186

• eth-sri/astarix

  AStarix: Fast and Optimal Sequence-to-Graph Aligner

  Language:C++727

• SamStudio8/naaaavi

  Naming avoiding ambiguity automatically assigning valid identifiers

  Language:Python323

• wojtekmaj/react-lifecycle-methods-diagram

  Interactive React Lifecycle Methods diagram.

  Language:TypeScript3.9k315

• pmelsted/bifrost

  Bifrost: Highly parallel construction and indexing of colored and compacted de Bruijn graphs

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• ICRAR/ijson

  Iterative JSON parser with Pythonic interfaces

  Language:Python79351

• bactopia/bactopia

  A flexible pipeline for complete analysis of bacterial genomes

  Language:Nextflow38266

• MoMI-G/MoMI-G

  Modular Multi-scale Integrated Genome Graph Browser

  Language:TypeScript856

• fabsarah/sweary_bot

  A bot that has your back. And swears. A lot.

  Language:Matlab1

• nstrayer/cv

  My CV built using RMarkdown and the pagedown package.

  Language:HTML527389

• labgem/PPanGGOLiN

  Build a partitioned pangenome graph from microbial genomes

  Language:Python23025

• bcaffo/LittleInferenceBook

  A book for the coursera statistical inference class

  Language:HTML373904

• bcaffo/courses

  Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

  Language:HTML1.9k14.7k

• EnzoAndree/tutorials

  In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given that you give proper credit. Have fun!

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• rstudio/pagedown

  Paginate the HTML Output of R Markdown with CSS for Print

  Language:R878130

• SionBayliss/PIRATE

  A toolbox for pangenome analysis and threshold evaluation.

  Language:Perl8829

• snakemake/snakemake

  This is the development home of the workflow management system Snakemake. For general information, see

  Language:HTML2.2k526

• ssi-dk/bifrost

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• iqbal-lab-org/pandora

  Pan-genome inference and genotyping with long noisy or short accurate reads

  Language:C++10714

• neherlab/pan-genome-analysis

  Processing pipeline for pan-genome visulization and exploration

  Language:Python13337

• neherlab/pan-genome-visualization

  Visualization of the pan-genome output by panX

  Language:JavaScript6014

• codeisscience/code-is-science

  Scientific code needs to be open source and peer reviewed

  Language:CSS13632

• thomas-keller/tweet-conf

  Some simple R scripts to collect and visualize twitter happenings around a conference hashtag

  Language:R51

• refweak/refweak

  A list of weak Bacterial assemblies in GenBank

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