Pinned Repositories
ADpred_publication
scripts and notebook for publication of ADpred
Shared
Confocal-z-stack-cell-detection
To facilitate repeatable, robust, and rapid analysis of a large number of confocal images of cells, we generated an open source automated image analysis pipeline that detects and quantifies cells in brightfield and/or fluorescent confocal z-stack images. The pipeline can be run through an R Shiny graphical user interface (GUI).
Hybrid_model_CEI_division
Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions
MSE
Modified Shannon Entropy
NodeAnalyzer
PF-NET
LisaVdB's Repositories
LisaVdB/PF-NET
LisaVdB/Confocal-z-stack-cell-detection
To facilitate repeatable, robust, and rapid analysis of a large number of confocal images of cells, we generated an open source automated image analysis pipeline that detects and quantifies cells in brightfield and/or fluorescent confocal z-stack images. The pipeline can be run through an R Shiny graphical user interface (GUI).
LisaVdB/Hybrid_model_CEI_division
Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions
LisaVdB/MSE
Modified Shannon Entropy
LisaVdB/NodeAnalyzer