LocasaleLab
We are a group of researchers at Duke University. Our research focuses on studying nutrition and metabolism in health and cancer using quantitative approaches.
Duke UniversityDurham, NC
Pinned Repositories
Automated-MFA-2023
A high-performance package for automated metabolic flux analysis
Dietary_methionine_restriction
Code and scripts for analyzing metabolomics datasets for mice and human subjects undergoing dietary methionine restriction.
H3K4me3_MET_Restriction
Codes and processed ChIP-seq and RNA-seq datasets for HCT116 human cancer cells and mouse liver
Lactate_MFA
Data and code for the MFA model for lactate and glucose utilization in tissues
MCA_thermodynamics
Source codes for simulation of flux control coefficients and thermodynamics in metabolic networks with representative structures
MFA-Collaboration-2024
This repo includes collaborations of MFA in Locasale Lab in 2024
MR-FA_Nature-Aging-2024
MYCextension_NCB2017
Reid-et-al-2018
Single-Cell-Metabolic-Landscape
Pipeline for exploring metebolic heterogeneity at single-cell resolution
LocasaleLab's Repositories
LocasaleLab/Single-Cell-Metabolic-Landscape
Pipeline for exploring metebolic heterogeneity at single-cell resolution
LocasaleLab/Lactate_MFA
Data and code for the MFA model for lactate and glucose utilization in tissues
LocasaleLab/Dietary_methionine_restriction
Code and scripts for analyzing metabolomics datasets for mice and human subjects undergoing dietary methionine restriction.
LocasaleLab/H3K4me3_MET_Restriction
Codes and processed ChIP-seq and RNA-seq datasets for HCT116 human cancer cells and mouse liver
LocasaleLab/MCA_thermodynamics
Source codes for simulation of flux control coefficients and thermodynamics in metabolic networks with representative structures
LocasaleLab/MYCextension_NCB2017
LocasaleLab/Reid-et-al-2018
LocasaleLab/Allen-et-al-2022
LocasaleLab/Automated-MFA-2023
A high-performance package for automated metabolic flux analysis
LocasaleLab/COVID_19_models
Mathematical models for the COVID-19 (SARS-CoV-2) pandemic
LocasaleLab/DiffQuant
machine learning-based tool designed to quantify C2C12 cell differentiation
LocasaleLab/Locasale-lab-2020-lipoic-acid-analog-study
Data and codes related to the CPI-613 inhibitor study (Reid, Bose, et al, 2020)
LocasaleLab/MFA-Collaboration-2024
This repo includes collaborations of MFA in Locasale Lab in 2024
LocasaleLab/mouse-sarcoma-scRNA
scRNA-seq analysis for studying the shifts of the tumor microenvironment upon digoxin treatment
LocasaleLab/MR-FA_Nature-Aging-2024