LouisK92

Pinned Repositories

oligo-designer-toolsuite
Develop custom oligo design pipelines.
Language:Python15 0 273
Baysor
Bayesian Segmentation of Spatial Transcriptomics Data
Language:Julia0 0 00
my_txsim
Language:Jupyter Notebook0 0 00
RS-FISH
Tool for precise, interactive, fast and scalable FISH spot detection
Language:Java0 0 00
squidpy
Spatial Single Cell Analysis in Python
Language:Python0 0 00
scanpy
Single-cell analysis in Python. Scales to >1M cells.
Language:Python2k 49 1.8k609
spatialdata-io
Language:Python45 6 11029
squidpy
Spatial Single Cell Analysis in Python
Language:Python448 10 52784
spapros
Python package for Probe set selection for targeted spatial transcriptomics.
Language:Python32 3 397
spapros_reproducibility
Language:Jupyter Notebook1 1 71

LouisK92's Repositories

LouisK92/Baysor
Bayesian Segmentation of Spatial Transcriptomics Data
Language:Julia0 0 00
LouisK92/my_txsim
Language:Jupyter Notebook0 0 00
LouisK92/RS-FISH
Tool for precise, interactive, fast and scalable FISH spot detection
Language:Java0 0 00
LouisK92/squidpy
Spatial Single Cell Analysis in Python
Language:Python0 0 00