Pinned Repositories
projectR
cummeRbund-BioC-Bridge
developing_mouse_retina_scRNASeq
10x single cell RNA-seq data from the developing mouse retina
goff_lab_styles
Collection of styles/templates/imagery for research products from the Goff Lab
scRNA_blank
Blank project framework for single cell RNA seq projects in gofflab
lncRNASpec
On the specificity of lncRNAs
powerglove
BrainMap
Mouse lncRNA Brain Map Project Data and Analysis
Loyale's Repositories
Loyale/powerglove
Loyale/lncRNASpec
On the specificity of lncRNAs
Loyale/Basset
Convolutional neural network analysis for predicting DNA sequence activity.
Loyale/blender_utils
Blender scripting utilities
Loyale/boglab_tools
TALE-NT Tools
Loyale/Creative-Commons-Markdown
Markdown-formatted Creative Commons licenses
Loyale/crossfilter
Fast n-dimensional filtering and grouping of records.
Loyale/cufflinks
Loyale/light-shift
A raspberry pi pico-controlled light source for daylight shifting an aquarium tank
Loyale/md-cv
markdown cv / résumé built with jekyll
Loyale/monocle-release
Loyale/PCRMiner
A python implementation of the PCR miner qPCR algorithm
Loyale/PhyloCSF
Phylogenetic analysis of multi-species genome sequence alignments to identify conserved protein-coding regions
Loyale/rna-seq-kallisto-sleuth
A workflow for RNA-seq differential expression analysis based on Kallisto and Sleuth.
Loyale/scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
Loyale/shinycuff
Shiny UI around cummeRbund
Loyale/spectacle
Loyale/Sushi
Tools for visualizing genomics data
Loyale/tcaR
Tree-dependent component analysis in R
Loyale/workflows
Workflow summaries for generic computational or informatic projects @ the Goff Lab