Pinned Repositories
BayesPrism
A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression
ethEpigen2024_materials
Materials for the 2024 ETH course "Bioinformatic approaches to regulatory genomics and epigenomics"
gtm-decon
PyPrism
A deconvolution framework for bulk RNA-seq count data based on BayesPrism, implementing the improved algorithm of InstaPrism in Python, integrated into the ScVerse, and interoperable with AnnData and HDF5 files.
LuJoHae's Repositories
LuJoHae/BayesPrism
A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression
LuJoHae/ethEpigen2024_materials
Materials for the 2024 ETH course "Bioinformatic approaches to regulatory genomics and epigenomics"
LuJoHae/gtm-decon
LuJoHae/PyPrism
A deconvolution framework for bulk RNA-seq count data based on BayesPrism, implementing the improved algorithm of InstaPrism in Python, integrated into the ScVerse, and interoperable with AnnData and HDF5 files.