[Question] An error occurred during installing nnUnet
XiaoXKKK opened this issue · 2 comments
XiaoXKKK commented
❓ Question
Logs:
......
copying build\lib\nnunet\experiment_planning\alternative_experiment_planning\target_spacing\experiment_planner_baseline_3DUNet_targetSpacingForAnisoAxis.py -> build\bdist.win-amd64\wheel\.\nnunet\experiment_planning\alternative_experiment_planning\target_spacing
error: could not create 'build\bdist.win-amd64\wheel\.\nnunet\experiment_planning\alternative_experiment_planning\target_spacing\experiment_planner_baseline_3DUNet_targetSpacingForAnisoAxis.py': No such file or directory
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for nnUnet
Running setup.py clean for nnUnet
Failed to build nnUnet
ERROR: Could not build wheels for nnUnet, which is required to install pyproject.toml-based projects
Python Version: 3.9.10
Torch Version: 2.3.1+cu118
Torch Vision Version: 0.18.1+cu118
partha-ghosh commented
To create a working environment with conda, please run:
conda create --name nndet_venv python=3.8
conda activate nndet_venv
and then please run the following commands to set it up:
git clone https://github.com/MIC-DKFZ/nnDetection.git
cd nnDetection
export CXX=$CONDA_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++
export CC=$CONDA_PREFIX/bin/x86_64-conda_cos6-linux-gnu-c++
conda install gxx_linux-64==9.3.0
conda install cuda -c nvidia/label/cuda-11.3.1
conda install pytorch==1.11.0 torchvision==0.12.0 torchaudio==0.11.0 cudatoolkit=11.3 -c pytorch
pip install -r requirements.txt \
&& pip install hydra-core --upgrade --pre \
&& pip install git+https://github.com/mibaumgartner/pytorch_model_summary.git
FORCE_CUDA=1 pip install -v -e .
XiaoXKKK commented
Thank you for your help, I've solved it.