MIRTK

Packages for the Medical Image Registration ToolKit of the BioMedIA group

London, UK

Pinned Repositories

BAtCh
Pairwise Brain Atlas Construction (BAtCh) HTCondor/SLURM workflow
Language:Shell1 2 00
CorticalSurfaceEvaluation
App for manual evaluation of reconstructed cortical surfaces.
Language:JavaScript10
Deformable
Deformable shape module with focus on neonatal cortex reconstruction.
Language:C++3 2 148
DrawEM
Developing brain Region Annotation With Expectation-Maximization
Language:C++20 6 2013
LBFGS
libLBFGS: a library of Limited-memory Broyden-Fletcher-Goldfarb-Shanno (L-BFGS)
Language:C1 2 02
MALPEM
Work in progress, use original package of Christian Ledig in the meantime.
Language:Python1 3 70
NIFTI
NIfTI C library from http://nifti.nimh.nih.gov/pub/dist/src/
Language:C1 3 02
REPEAT
REgistration PErformance Assessment Tools
Language:Shell1 2 13
Scripting
Scripting utilities of the Medical Image Registration ToolKit (MIRTK).
Language:Python1 2 00
Viewer
The companion viewer for MIRTK, known as rview as part of IRTK.
Language:C++2 3 14

MIRTK's Repositories

MIRTK/DrawEM
Developing brain Region Annotation With Expectation-Maximization
Language:C++20 6 2013
MIRTK/Deformable
Deformable shape module with focus on neonatal cortex reconstruction.
Language:C++3 2 148
MIRTK/Viewer
The companion viewer for MIRTK, known as rview as part of IRTK.
Language:C++2 3 14
MIRTK/BAtCh
Pairwise Brain Atlas Construction (BAtCh) HTCondor/SLURM workflow
Language:Shell1 2 00
MIRTK/CorticalSurfaceEvaluation
App for manual evaluation of reconstructed cortical surfaces.
Language:JavaScript10
MIRTK/LBFGS
libLBFGS: a library of Limited-memory Broyden-Fletcher-Goldfarb-Shanno (L-BFGS)
Language:C1 2 02
MIRTK/MALPEM
Work in progress, use original package of Christian Ledig in the meantime.
Language:Python1 3 70
MIRTK/NIFTI
NIfTI C library from http://nifti.nimh.nih.gov/pub/dist/src/
Language:C1 3 02
MIRTK/REPEAT
REgistration PErformance Assessment Tools
Language:Shell1 2 13
MIRTK/Scripting
Scripting utilities of the Medical Image Registration ToolKit (MIRTK).
Language:Python1 2 00
MIRTK/Boost
Boost header files required by Medical Image Registration ToolKit (MIRTK).
Language:C++2 01
MIRTK/Eigen
Eigen header files required by Medical Image Registration ToolKit (MIRTK).
Language:C++2 02
MIRTK/GIFTI
GIFTI C library from https://www.nitrc.org/projects/gifti/
Language:C2 01
MIRTK/Mapping
Brain mapping module of the Medical Image Registration ToolKit (MIRTK).
Language:C++2
MIRTK/MetaIO
MetaImage is the text-based tagged file format for medical images that resulted. We have now extended that file format to support a variety of objects that occur in medicine such a tubes (for vessels, needles, etc.), blobs (for arbitrary shaped objects), cubes, spheres, etc. The complete library is known at MetaIO.
Language:C++1 0
MIRTK/mirtk.github.io
Online documentation of Medical Image Registration ToolKit (MIRTK)
Language:HTML2

MIRTK

Pinned Repositories

BAtCh

CorticalSurfaceEvaluation

Deformable

DrawEM

LBFGS

MALPEM

NIFTI

REPEAT

Scripting

Viewer

MIRTK's Repositories

MIRTK/DrawEM

MIRTK/Deformable

MIRTK/Viewer

MIRTK/BAtCh

MIRTK/CorticalSurfaceEvaluation

MIRTK/LBFGS

MIRTK/MALPEM

MIRTK/NIFTI

MIRTK/REPEAT

MIRTK/Scripting

MIRTK/Boost

MIRTK/Eigen

MIRTK/GIFTI

MIRTK/Mapping

MIRTK/MetaIO

MIRTK/mirtk.github.io