MIT Laboratory for Computational Physiology
Research on improving health care through data analysis, including use of MIMIC-III and other data sources
Cambridge, MA
Pinned Repositories
critical-data-book
Code repository for the critical data book
eicu-code
Code and website related to the eICU Collaborative Research Database
mimic-code
MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
mimic-cxr
Code, documentation, and discussion around the MIMIC-CXR database
mimic-iii-paper
Repository for the paper describing MIMIC-III
mimic-iv
Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code
mimic-omop
Mapping the MIMIC-III database to the OMOP schema
mimic-website
Website for the MIMIC Critical Care Database (currently version MIMIC-III)
mimic-workshop
Introduction to MIMIC-III, the Critical Care Database
wfdb-python
Native Python WFDB package
MIT Laboratory for Computational Physiology's Repositories
MIT-LCP/mimic-code
MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
MIT-LCP/wfdb-python
Native Python WFDB package
MIT-LCP/eicu-code
Code and website related to the eICU Collaborative Research Database
MIT-LCP/mimic-omop
Mapping the MIMIC-III database to the OMOP schema
MIT-LCP/mimic-website
Website for the MIMIC Critical Care Database (currently version MIMIC-III)
MIT-LCP/physionet
A collection of tools for working with the PhysioNet repository.
MIT-LCP/physionet-build
The new PhysioNet platform.
MIT-LCP/oracle2postgres
Migrate data from an Oracle database to a Postgres database
MIT-LCP/sccm-datathon
Resources for the Society of Critical Care Medicine (SCCM) Datathon
MIT-LCP/waveform-annotation
Platform for annotating physiological waveform data.
MIT-LCP/bidmc-datathon
Materials for the BIDMC datathon (Sat 29 Feb 2020)
MIT-LCP/hack-aotearoa
Sample code for Hack Aotearoa 2023
MIT-LCP/vancomycin-nephrotoxicity
Study in eICU-CRD about vancomycin and associated nephrotoxicity
MIT-LCP/critical-data
Website for critical-data
MIT-LCP/license-and-dua
The PhysioNet Data Use Agreement and License
MIT-LCP/citation-tracker
Tools for tracking citations to MIMIC, PhysioNet etc.
MIT-LCP/datathon-package
Pip installable package containing helper functions for datathons
MIT-LCP/mimic-iv-demo-omop
MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitted to critical care units at a large tertiary care hospital. This repository contains the ETL to the OMOP CDM.
MIT-LCP/mit-lcp.github.io
Website for the LCP Laboratory https://lcp.mit.edu
MIT-LCP/aws-physionet-open-data
Script for generating the PhysioNet pages in the AWS Open Data Registry
MIT-LCP/cwmed
A Python package that facilities the conversion of clinical terminology between two different coding systems for interoperability.
MIT-LCP/datathon-gossis
Resources for the GOSSIS datathon in Pittsburgh
MIT-LCP/mimic-iv-datathon
MIT-LCP/plibflac
Read and write FLAC audio files in Python
MIT-LCP/the-bias-glossary
MIT-LCP/django-static-mathjax
MathJax package for Django
MIT-LCP/metaann
Collaborative labelling of events in physiological waveforms
MIT-LCP/mimic-echo
Structured data from echocardiogram reports
MIT-LCP/mimic-iv-ecg-ve
Vector Embedding Pipeline for MIMIC-IV-ECG
MIT-LCP/scrub_faces
Scrub/blur faces in a dataset of images.