Shapes
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explodecomputer commented
Allow summaryset
and dataset
to have a shape
slot. dataset
to also have a trait organisation
slot.
shape
attribute:
- "single region"
- "multiple region"
- "independent variants" / "scattered"
- "genome wide - pruned"
- "genome wide - full"
- NA
trait organisation
attribute:
- named list of integers
- e.g. TwoSampleMR will expect named list with names "lhs" and "rhs"
For now
- Set to NA by default
- Allow user to specify shape
show
andplot
methods might do different things based on different shapes
Later
- method to automatically guess shape
- analytical tools expect specific shapes (e.g. hypercoloc experts "single region" with n>1 traits that are in a single group)