MRC Integrative Epidemiology Unit

University of Bristol, UK

Pinned Repositories

awesome-ai
Awesome list for all things AI, ML and deep learning
53 11 06
epigraphdb
Examples on using EpiGraphDB
Language:Jupyter Notebook26 8 06
epigraphdb-pqtl
This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.
Language:R39 3 113
gwas2vcf
Convert GWAS summary statistics to VCF
Language:Python47 16 6618
gwasglue
Linking GWAS data to analytical tools in R
Language:R120 13 3539
gwasvcf
Reading, querying and writing GWAS summary data in VCF format
Language:HTML69 10 2517
ieugwasr
R interface to the IEU GWAS database API
Language:R82 8 10023
MRInstruments
Data objects for various sets of instruments
Language:R43 20 719
PHESANT
PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
Language:R139 13 4368
TwoSampleMR
R package for performing 2-sample MR using MR-Base database
Language:R445 29 427177

MRC Integrative Epidemiology Unit's Repositories

MRCIEU/TwoSampleMR
R package for performing 2-sample MR using MR-Base database
Language:R445 29 427177
MRCIEU/ieugwasr
R interface to the IEU GWAS database API
Language:R82 8 10023
MRCIEU/UKBiobankGWAS
Notes and code for running UK Biobank GWAS at the MRC IEU
Language:Python15 8 04
MRCIEU/GeneHackman
Pipeline for genetic epidemiology projects at Univsersity of Bristol
Language:R13 10 01
MRCIEU/python_and_health_ds_training
Repo for Introductions to Python and Applied Health Data Science Training
Language:Jupyter Notebook92
MRCIEU/bp-drug-mr
Multi-ancestry MR of blood pressure drug targets
Language:HTML6 6 12
MRCIEU/temmpo
Text mining for mechanism prioritisation
Language:Python6 6 12
MRCIEU/Lifecourse-GWAS
Language:R5 5 21
MRCIEU/opengwas-api
API for MRC-IEU OpenGWAS
Language:Python5 7 102
MRCIEU/mrcieu.r-universe.dev
R packages for mrcieu.r-universe.dev
4 7 21
MRCIEU/GwasDataImport
R package to upload data to GWAS database
Language:R3 16 61
MRCIEU/dnam-lung-cancer-screening-panel
Language:HTML2
MRCIEU/ukb-rap-utils
Language:Shell2 4 0
MRCIEU/epigraphdb-asq
Annotated Semantic Queries
Language:Jupyter Notebook1 7 0
MRCIEU/medication-adjustment
Language:R1
MRCIEU/MSHDS-AHDS-formative
Language:Shell10
MRCIEU/upptime
Use upptime to monitor web platform status
Language:JSON1 6 103
MRCIEU/bbt_research
Research on basal body temperature
Language:Python1 0
MRCIEU/conda-hpc-snakemake-example
Example for AHDS
Language:R23
MRCIEU/docker_twosamplemr
Dockerfile for TwoSampleMR DockerHub image
Language:Dockerfile
MRCIEU/genotype-phenotype-api
Language:JavaScript
MRCIEU/ieu-retreat-workshop-conda-snakemake
Language:R
MRCIEU/IL6-activity
Modelling the effect of IL-6 bioavailability/activity using genetic variants.
Language:R6 0
MRCIEU/molecular-epidemiology-meeting
MRCIEU/mr-pubmed-abstracts
Analysis of MR PubMed Abstracts
Language:Python7 01
MRCIEU/opengwas-phewas-indexing
Language:Python
MRCIEU/opengwas-redis-proxy
Language:Python
MRCIEU/quarto-intro
Introduction to quarto given at the IEU retreat
Language:JavaScript1
MRCIEU/rare-polygenic
Language:R
MRCIEU/traithunter
Language:Jupyter Notebook