MRC Integrative Epidemiology Unit

University of Bristol, UK

Pinned Repositories

awesome-ai
Awesome list for all things AI, ML and deep learning
51 11 06
epigraphdb
Examples on using EpiGraphDB
Language:Jupyter Notebook26 8 06
epigraphdb-pqtl
This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.
Language:R37 3 113
gwas2vcf
Convert GWAS summary statistics to VCF
Language:Python47 16 6618
gwasglue
Linking GWAS data to analytical tools in R
Language:R113 13 3539
gwasvcf
Reading, querying and writing GWAS summary data in VCF format
Language:HTML67 10 2417
ieugwasr
R interface to the IEU GWAS database API
Language:R72 8 9623
MRInstruments
Data objects for various sets of instruments
Language:R43 20 719
PHESANT
PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
Language:R136 13 4368
TwoSampleMR
R package for performing 2-sample MR using MR-Base database
Language:R431 29 425176

MRC Integrative Epidemiology Unit's Repositories

MRCIEU/gwasglue
Linking GWAS data to analytical tools in R
Language:R113 13 3539
MRCIEU/gwas-vcf-specification
Specification for the GWAS-VCF format (manuscript in preparation)
23 8 143
MRCIEU/GLU
A tool for analysing continuous glucose monitoring (CGM) data in epidemiology.
Language:R11 9 210
MRCIEU/pygwasvcf
Python library for reading GWAS summary statistics in GWAS-VCF files
Language:Python8 8 95
MRCIEU/godmc_phase2_analysis
Language:HTML61
MRCIEU/ewascatalog-r
Language:R4 10 0
MRCIEU/ukbb-covid-collider
Language:TeX4 7 0
MRCIEU/epigraphdb-ctda
codes for the epigraphdb CTAD database
Language:R3 8 0
MRCIEU/sleep_duration_pregnancy
Here we provide scripts used in 'Investigating causal relations between sleep duration and risks of adverse pregnancy and perinatal outcomes: Linear and nonlinear Mendelian randomization analyses in up to 356,069 European women'
Language:R3 6 01
MRCIEU/varGWAS
GWAS of trait variance (C++)
Language:R3 7 41
MRCIEU/hie-ml
Language:R2 6 0
MRCIEU/met-d-import
UKBB Nightingale import to OpenGWAS
Language:R2 7 0
MRCIEU/variance-iv4-violation
Language:R2
MRCIEU/COVIDITY_selbias
COVIDITY BHF-Project - Working Package 3 about selection bias in COVID-19 studies across UK cohorts
Language:R1 7 00
MRCIEU/finn-b-import
Import Finngen R5 GWAS
Language:R1 7 0
MRCIEU/met-e-import
Language:R1 6 0
MRCIEU/mrtwin_power
Language:R1
MRCIEU/oci-elastic
IEU version of https://github.com/cloud-partners/oci-elastic
Language:HCL1 7 0
MRCIEU/panukbb_gwas_import
Import pan UKBB GWAS analysis https://pan.ukbb.broadinstitute.org/
Language:R1 7 0
MRCIEU/covid-cancer
The network of SARS-CoV-2—cancer molecular interactions and pathways
Language:R0 7 00
MRCIEU/food-diary-alexa-pilot-aws
Alexa skill backend logic, deployed on Amazon AWS
Language:Java0 6 00
MRCIEU/advanced_epi_MRpractical
MRCIEU/coloc-sims
Language:R7 0
MRCIEU/dnam-fev1
Language:HTML
MRCIEU/dnam_cors
Language:HTML6 0
MRCIEU/epigraphdb_common_utils
Language:Python8 0
MRCIEU/epigraphdb_neural
Language:Jupyter Notebook
MRCIEU/lp-coevolution
Language:R6 0
MRCIEU/opengwas-metadata-curation
Language:R
MRCIEU/ScaleHDALSPAC
Automated DNA micro-satellite genotyping customised for ALSPAC