LD clumping

Question

Opened this issue 5 years ago · 2 comments

LD clumping

Answer 1 · 2023-12-11T17:13:30.000Z

Hi,

I'm trying to find the LD clumping function, but can't find it (or documentation that would explain it).

Thanks :)

Frida

Answer 2 · 2023-12-13T11:49:08.000Z

If you use TwoSampleMR we have the TwoSampleMR::clump_data() function, see https://mrcieu.github.io/TwoSampleMR/reference/clump_data.html which calls the ld_clump() function in ieugwasr https://mrcieu.github.io/ieugwasr/reference/ld_clump.html