.rmd error - 'reshape' package
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lauracorbin commented
When I ran the run_MetaboQC_pipeline.R script there was an error generated during the running of the .rmd report, as follows:
Quitting from lines 123-141 (QC_Report.Rmd)
Error in loadNamespace(name) : there is no package called 'reshape'
Calls: ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
I was able to fix this by manually installing the 'reshape' package prior to running the run_MetaboQC_pipeline.R script but presumably this package should be installed as a dependency as part of the main package install?
hughesevoanth commented
I have added the reshape package to the DESCRIPTION file. This should solve this problem.