Enrichr analysis error

[dbau]

Hi,

I have a problem with the Enrichr analysis. When I run it as:

# Initialize results
results['enrichr'] = {}

# Loop through signatures
for label, signature in signatures.items():

    # Run analysis
    results['enrichr'][label] = analyze(signature=signature, tool='enrichr', signature_label=label, geneset_size=500)

    # Display results
    plot(results['enrichr'][label])

I get the following error:

Exception                                 Traceback (most recent call last)
<ipython-input-62-6cd0bc5bc6ce> in <module>()
      6 
      7     # Run analysis
----> 8     results['enrichr'][label] = analyze(signature=signature, tool='enrichr', signature_label=label, geneset_size=500)
      9 
     10     # Display results

<ipython-input-1-835cab3f0c8d> in analyze(tool, **kwargs)
     69                 kwargs['dataset'][normalization_method] = normalize_dataset(method = normalization_method, dataset=kwargs['dataset'])
     70 
---> 71         return {'results': eval(tool).run(**kwargs), 'tool': tool}
     72 
     73 # Plot

/library/v1.0.5/analysis_tools/enrichr/enrichr.py in run(signature, geneset_size, libraries, signature_label)
     60 
     61         # Submit to Enrichr
---> 62         enrichr_ids = {geneset_label: submit_enrichr_geneset(geneset=geneset, label=signature_label+', '+geneset_label+', from BioJupies') for geneset_label, geneset in genesets.items()}
     63         enrichr_ids['signature_label'] = signature_label
     64         return enrichr_ids

/library/v1.0.5/analysis_tools/enrichr/enrichr.py in <dictcomp>(.0)
     60 
     61         # Submit to Enrichr
---> 62         enrichr_ids = {geneset_label: submit_enrichr_geneset(geneset=geneset, label=signature_label+', '+geneset_label+', from BioJupies') for geneset_label, geneset in genesets.items()}
     63         enrichr_ids['signature_label'] = signature_label
     64         return enrichr_ids

/library/v1.0.5/analysis_tools/enrichr/enrichr.py in submit_enrichr_geneset(geneset, label)
     47         response = requests.post(ENRICHR_URL, files=payload)
     48         if not response.ok:
---> 49                 raise Exception('Error analyzing gene list')
     50         time.sleep(0.5)
     51         data = json.loads(response.text)

Exception: Error analyzing gene list

I can I fix it?

Thanks in advance!
Davide

[dbau]

Hi,

Any news on this issue? Could Biojupies use the new enrichr server to overcome this error?

Thanks,
Davide