MaeWoods
Postdoc at Baylor College of Medicine. Interested in developmental biology immunology, genetics and gene therapy. Mostly programming in Rcpp & learning Julia.
Pinned Repositories
abcsmc-batch
A batch implementation of abcsmc. Your simulation and distance function should be contained in simulation.cpp
demGPU
A GPU implementation of the discrete element method to predict response to co-attractants of self propelled objects.
dynamicCIN
c++ source code developments based on models of genomics instability.
hierarchical-abcsmc
A module built on top of abcsysbio (http://www.theosysbio.bio.ic.ac.uk/resources/abc-sysbio/). To perform approximate Bayesian computation sequential Monte-Carlo on a hierarchical model within the abcsysbio framework.
picasso
Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.
scGeneFit-python
Python code for genetic marker selection using linear programming
scScratch
Do not use this package. This repo is for developments only and program testing only and team projects, this package is not intended for use.
MaeWoods's Repositories
MaeWoods/demGPU
A GPU implementation of the discrete element method to predict response to co-attractants of self propelled objects.
MaeWoods/abcsmc-batch
A batch implementation of abcsmc. Your simulation and distance function should be contained in simulation.cpp
MaeWoods/dynamicCIN
c++ source code developments based on models of genomics instability.
MaeWoods/hierarchical-abcsmc
A module built on top of abcsysbio (http://www.theosysbio.bio.ic.ac.uk/resources/abc-sysbio/). To perform approximate Bayesian computation sequential Monte-Carlo on a hierarchical model within the abcsysbio framework.
MaeWoods/picasso
Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.
MaeWoods/scGeneFit-python
Python code for genetic marker selection using linear programming
MaeWoods/scScratch
Do not use this package. This repo is for developments only and program testing only and team projects, this package is not intended for use.