Pinned Repositories
AMICO
Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
BEaST
C implementation of Brain Extraction based on nonlocal Segmentation Technique
caffe
Caffe: a fast open framework for deep learning.
CCS
Connectome Computation System
cluster_roi
Python script to perform the spatially constrained parcellation of functional MRI data as described in Craddock et al., Human Brain Mapp., 33 (9) 2012
deepmedic
Efficient Multi-Scale 3D Convolutional Neural Network for Brain Lesion Segmentation
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
dicomifier
Convert data from Bruker to DICOM and from DICOM to NIfTI
framework
Machine learning, computer vision, statistics and general scientific computing for .NET
mrtrix3
MRtrix provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density
Marphy's Repositories
Marphy/fftw3
This is the official repository for the FFTW Fourier transform library, version 3.x
Marphy/PyMVPA
MultiVariate Pattern Analysis in Python
Marphy/AMICO
Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
Marphy/scikit-learn
scikit-learn: machine learning in Python
Marphy/SimpleITK
SimpleITK: a simplified layer build on top of the Insight Toolkit (ITK), intended to facilitate its use in rapid prototyping, education and interpreted languages.
Marphy/medInria-public
Open-source part of the medInria software
Marphy/vistasoft
Marphy/PRML
Pattern recognition and machine learning toolbox
Marphy/SimpleITK-MICCAI-2011-Tutorial
Repo for the SimpleITK tutorial at MICCAI 2011