MattStammers
Consultant Gastroenterologist & open-source software developer with a particular interest in the application of modelling, NLP, and RL to medicine
University Hospital SouthamptonSouthampton, UK
Pinned Repositories
Community_Of_Practice_Session_Two
Basic Training for BI Analysts in Data Science and Data Engineering
hdruk_avoidable_admissions
fork of Vishnu's hdruk repo
hdruk_avoidable_admissions_collaboration_docs
Repository for sharing data models and information for the national HDRUK avoidable admissions project
hdruk_chest_pain_collaboration_docs
HDRUK chest pain project docs and code for collaboration repo
Jinxs_Adventure
A fully open-source computer game written in python complete with physics using pymunk
PPO_Lander_Implementation
Starting to delve in to explicitly programmed open-source deep reinforcement learning agents
Pteredactyl
A python module for redaction of personally identifiable information (PII) in clinical free-text
sample-factory-sotaquest
SOTA Performance with APPO and Sample Factory
Elective_Recovery_Model
Moderate: This model looks at Covid-19 recovery in the NHS and takes you through the different ways to compile an ASDM model
Pteredactyl
A python module for redaction of personally identifiable information (PII) in clinical free-text
MattStammers's Repositories
MattStammers/MkDocsPoetry
MkDocs and Poetry Test
MattStammers/https-github.com-XingqiaoWang-DeepCausality-LiverTox
very interesting paper here
MattStammers/CaRROT-Mapper
CaRROT: Convenient And Reusable Rapid Omop Transformer.
MattStammers/elsapy
A Python module for use with Elsevier's APIs: Scopus, ScienceDirect, others.
MattStammers/Dino_Attack
A second open source game in python
MattStammers/obsidian-citation-plugin
Obsidian plugin which integrates your academic reference manager with the Obsidian editor. Search your references from within Obsidian and automatically create and reference literature notes for papers and books.
MattStammers/PyScript
Experiments with PyScript
MattStammers/Goal_Gap_Model
Elective Backlog Goal Gap Model
MattStammers/Jinxs_Adventure
A fully open-source computer game written in python complete with physics using pymunk
MattStammers/kiamol
Learn Kubernetes in a Month of Lunches
MattStammers/streamlit-example
Example Streamlit app that you can fork to test out share.streamlit.io
MattStammers/skunkworks-long-stayer-risk-stratification
NHS AI Lab Skunkworks project: Long Stayer Risk Stratification
MattStammers/qnotero
Standalone sidekick to the Zotero reference manager
MattStammers/awesome-markdown
A collection of awesome markdown goodies (libraries, services, editors, tools, cheatsheets, etc.)
MattStammers/robotreviewer
Automatic synthesis of RCTs
MattStammers/UHSPheKnowLator
Fork of Tiff Callahan's excellent PheKnowLator repo
MattStammers/OMOP2OBO
OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
MattStammers/Food_Scarcity_Training_Model
Simple SD Training Model
MattStammers/PyMedSD
Open Source System Dynamics Modelling
MattStammers/comorbidipy
Python package to calculate comorbidity scores including Charlson Comorbidity Score and Elixhauser Score and their weighted variants.
MattStammers/redux-leaf
Python programming homework challenge for intro level data engineering interview. 17/09/2021- 01/10/2021
MattStammers/pyConTextNLP
another interesting implementation
MattStammers/DeepCausalPV-master
very interesting work
MattStammers/Python-Foundations
This is the more advanced Python repository for growing Clinician_Developers
MattStammers/R_For_Medics
An Introduction To R For Clinician Developers
MattStammers/ClinDev-algorithms
Clinical Developers Challenge
MattStammers/Python_For_Data_Science_Intro
Data Science In Python Code Repository For Clinician Developers
MattStammers/Clinical_Developer_Challenges
This Is The Code Repository For Past Clinical Developer Challenges
MattStammers/Javascript_For_Medics
An Introduction to Javascript for Clinician Developers
MattStammers/ABCD2
ABCD2_Repo