MatthewMah

Pinned Repositories

cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Language:Scala1k 111 2.9k360
AdmixTools
Tools test whether admixture occurred and more
Language:C183 18 10265
ADNA-Tools
This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.
Language:Java18 6 22
adna-workflow
Workflow for processing Illumina sequencing runs for ancient human DNA
Language:Python20 6 85
cTools
Tools for accessing SGDP lite data
Language:C7 6 06
EIG
Eigen tools by Nick Patterson and Alkes Price lab
Language:C181 17 9760
adna
Processing WGS aDNA data using the ReichLab protocol
Language:C0 1 00
preseq
Software for predicting library complexity and genome coverage in high-throughput sequencing.
Language:C0 1 00
wdl
Workflow Description Language - Specification and Implementations
Language:Java0 0 00
PMDtools
Compute postmortem damage patterns and decontaminate ancient genomes
Language:Python15 3 87

MatthewMah's Repositories

MatthewMah/adna
Processing WGS aDNA data using the ReichLab protocol
Language:C0 1 00
MatthewMah/preseq
Software for predicting library complexity and genome coverage in high-throughput sequencing.
Language:C0 1 00
MatthewMah/wdl
Workflow Description Language - Specification and Implementations
Language:Java0 0 00