Mbelelep
Clinical microbiologist and Laboratory Medicine Physician.
Kibong'oto Infectious Diseases HospitalKilimanjaro, Tanzania
Pinned Repositories
Bioinformatics-BC
New to Bioinformatics? Start Here!
Biological_databases_API
An introduction to Biological Databases and how the API can be used to access data
gitmbelele_tbcure
first repository
Intro2MachineLearning
IntroductoryGit
IntroductoryLinux-2019
microbiome_helper
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
mini-projects
Mini-projects for the residential training
MTBseq_source
MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.
Mbelelep's Repositories
Mbelelep/microbiome_helper
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
Mbelelep/gitmbelele_tbcure
first repository
Mbelelep/Intro2MachineLearning
Mbelelep/ReproducibleResearch
Additional Training materials for workflows and package management
Mbelelep/Phylogenetics
This is the repository for the module on phylogenetics (Thursday 11 July 2019)
Mbelelep/Workflows_and_package_management
Reproducibility and package management : workflow languages (CWL, Snakemake, Conda).
Mbelelep/Scientific_presentation_skills
Mbelelep/mini-projects
Mini-projects for the residential training
Mbelelep/Biological_databases_API
An introduction to Biological Databases and how the API can be used to access data
Mbelelep/IntroductoryLinux-2019
Mbelelep/MyFirstFork
Fork this repository and make changes to the README
Mbelelep/IntroductoryGit
Mbelelep/MTBseq_source
MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.
Mbelelep/phyloseq
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
Mbelelep/Bioinformatics-BC
New to Bioinformatics? Start Here!
Mbelelep/Shell_Intro_for_Bioinformatics_STG
Intro to Shell for Bioinformatics - with STG examples
Mbelelep/Shell_Intro_for_Transcriptomics
Intro Shell Course Designed as a Precursor for Bioinformatics Courses