Pinned Repositories
assaytools
Modeling and Bayesian analysis of fluorescence and absorbance assays.
IR783-QSNAP
Analysis of Quantitative Structure-Nanoparticle Assembly Prediction (QSNAP) descriptors for predicting drug-indocyanine dye (IR783) nanoparticle formation.
nano-drugbank
Cheminformatic analysis of small molecule type drugs in DrugBank for their ability to form nanoparticles with indocyanine dyes.
sampl6-physicochemical-properties
SAMPL6 physicochemical property prediction challenge (logD, pKa and solubility)
algebra
A tool for algebraic manipulation. (For reproducible scientific programming training.)
SAMPL6
Challenge inputs, details, and results for the SAMPL6 series of challenges
SAMPL7
Challenge details, inputs, and results for the SAMPL7 series of challenges
MehtapIsik's Repositories
MehtapIsik/algebra
A tool for algebraic manipulation. (For reproducible scientific programming training.)
MehtapIsik/assaytools
Python tools for the modeling and Bayesian analysis of fluorescence assays
MehtapIsik/bayesian-itc
Python tools for the analysis and modeling of isothermal titration calorimetry (ITC) experiments.
MehtapIsik/density-measurements
Density measurements made with the Chodera lab Mettler-Toledo DM40 and SC30 sample changer
MehtapIsik/ensembler
Software pipeline for automating omics-scale protein modeling and simulation setup.
MehtapIsik/hsa-affinity
All Human Serum Albumin affinity measurements will be deposited here.
MehtapIsik/Human-Serum-Albumin
Human serum albumin experiments and analysis
MehtapIsik/IR783-QSNAP
Analysis of Quantitative Structure-Nanoparticle Assembly Prediction (QSNAP) descriptors for predicting drug-indocyanine dye (IR783) nanoparticle formation.
MehtapIsik/itctools
Tools for setting up ITC experiments in an automated fashion using the Tecan EVO and Auto-iTC 200.
MehtapIsik/kinase_inhibitors_and_assaytools
Example binding assay analysis with assaytools that was run on lilac.
MehtapIsik/liquid-handling-tester
Repository for development of two dye based liquid handler testing system.
MehtapIsik/model_systems
Selection of model binding systems
MehtapIsik/nano-drugbank
Cheminformatic analysis of small molecule type drugs in DrugBank for their ability to form nanoparticles with indocyanine dyes.
MehtapIsik/pythonsandbox
For testing out and learning Python
MehtapIsik/TargetExplorer
Database framework with RESTful API for genomic, structural, and functional data for target protein families.
MehtapIsik/test
MehtapIsik/test2
MehtapIsik/unit-testing-seminar
Unit Testing for Reproducible Science seminar at Sloan Kettering