Pinned Repositories
d3flux
D3.js based visualizations of cobrapy metabolic models
dash-cytoscape
Interactive network visualization in Python and Dash, powered by Cytoscape.js
explore_machine_learning
Just a series of notebook to explore machine learning methods with biological sciences examples
GSEApy
Gene Set Enrichment Analysis in Python
HMG
Heterogeneous Multiphasic Growth (HMG) based on the Cooper-Helmstetter cell cycle model for the simulation of (K-12 and TOP10) bacterial populations growth in a well-mixed environment
intersectomics
Package to study time series (or other series) multi-omics patterns of expresssion with replicates
interspersed_repeat
Find the interspersed repeats in a DNA sequence that are 9bp or larger
metaxime
Collection of projects for the analysis of metabolic pathways in cellular metabolisms
metaxime-frontend
A javascript frontend to the metaxime project
retrosynthesis
Whole retrosynthesis pipeline using RetroRules, RetroPath2.0 and RP2paths
Melclic's Repositories
Melclic/d3flux
D3.js based visualizations of cobrapy metabolic models
Melclic/interspersed_repeat
Find the interspersed repeats in a DNA sequence that are 9bp or larger
Melclic/retrosynthesis
Whole retrosynthesis pipeline using RetroRules, RetroPath2.0 and RP2paths
Melclic/dash-cytoscape
Interactive network visualization in Python and Dash, powered by Cytoscape.js
Melclic/explore_machine_learning
Just a series of notebook to explore machine learning methods with biological sciences examples
Melclic/GSEApy
Gene Set Enrichment Analysis in Python
Melclic/HMG
Heterogeneous Multiphasic Growth (HMG) based on the Cooper-Helmstetter cell cycle model for the simulation of (K-12 and TOP10) bacterial populations growth in a well-mixed environment
Melclic/intersectomics
Package to study time series (or other series) multi-omics patterns of expresssion with replicates
Melclic/metaxime
Collection of projects for the analysis of metabolic pathways in cellular metabolisms
Melclic/metaxime-frontend
A javascript frontend to the metaxime project
Melclic/RetroPath2
Perform retrosynthesis to calculate possible metabolic routes from a collection of sink files to a target
Melclic/RnaSeqSampleSize
Continue the development and maintenance of the package RnaSeqSampleSize
Melclic/OmicsStatsLib
Library to perform omics data processing and basic statistical analysis
Melclic/Searchlight2
Automated bulk RNA-seq exploration and visualisation using dynamically generated R-scripts.
Melclic/sktime
A unified framework for machine learning with time series
Melclic/smilesDrawer
A small, highly performant JavaScript component for parsing and drawing SMILES strings. Released under the MIT license.
Melclic/stats_explore
Just personal project to explore different statistical methods
Melclic/vue_test