Pinned Repositories
awesome-shell
A curated list of awesome command-line frameworks, toolkits, guides and gizmos. Inspired by awesome-php.
awesome-single-cell
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
BASIC
BASIC: BCR and TCR assembly from single cell RNA-seq
books
books
bracer
BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data
cdhit
Automatically exported from code.google.com/p/cdhit
cellranger
10x Genomics Single Cell 3' Gene Expression and VDJ Assembly
immcantation
nCov
Meng0625's Repositories
Meng0625/immcantation
Meng0625/nCov
Meng0625/awesome-shell
A curated list of awesome command-line frameworks, toolkits, guides and gizmos. Inspired by awesome-php.
Meng0625/awesome-single-cell
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Meng0625/bracer
BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data
Meng0625/cdhit
Automatically exported from code.google.com/p/cdhit
Meng0625/cloudman
Easily create and manage compute clusters on any Cloud.
Meng0625/DeepCAT
Deep Learning Method to Identify Cancer Associated TCRs
Meng0625/deepLearningProject
The deep learning project for Course Deep Learning hosting by CHE, Wanxiang
Meng0625/dragonstar2019
Meng0625/Falco
A quick and flexible single-cell RNA-seq processing framework on the cloud
Meng0625/IGoR
IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:
Meng0625/immunarch
immunarch: An R Package for Painless Analysis of Large-Scale Immune Repertoire Data
Meng0625/immunedb
ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data
Meng0625/iSMART
Highly specific clustering of T cell receptor CDR3s
Meng0625/linuxtools_rst
Linux工具快速教程
Meng0625/navi
An interactive cheatsheet tool for the command-line
Meng0625/nextflow
A DSL for data-driven computational pipelines
Meng0625/og-aws
📙 Amazon Web Services — a practical guide
Meng0625/scDeepCluster
scDeepCluster for Single Cell RNA-seq data
Meng0625/scImmunomics
some supplementary file for scPlatform
Meng0625/scPred
R package for cell type prediction based on SVD and ML approaches
Meng0625/scRNA.seq.course
Analysis of single cell RNA-seq data course
Meng0625/scScope
Meng0625/ShadowsocksX-NG
Next Generation of ShadowsocksX
Meng0625/SONIA
Infer selection pressures on features of amino acid CDR3 sequences.
Meng0625/STARTapp
The START App: R Shiny Transcriptome Analysis Resource Tool
Meng0625/tcr-dist
Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)
Meng0625/team-learning
Datawhale组队学习计划与课程内容
Meng0625/tracer
TraCeR - reconstruction of T cell receptor sequences from single-cell RNAseq data