MicheleBortol
Single-cell Open Lab, German Cancer Research Center (DKFZ), Heidelberg, GermanyHeidelberg
MicheleBortol's Stars
sukunis/OMERO.openlink
An OMERO.web app for sharing data and prepare data for web download
cxli233/FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
kasparmartens/shared-private-multimodalVAE
PyTorch implementation for shared-private Multimodal Variational Autoencoders
dockersamples/awesome-compose
Awesome Docker Compose samples
sebgoti/napari-spacetx-explorer
A simple plugin for an interactive visualization of spatial omics data.
sakai135/wsl-vpnkit
Provides network connectivity to WSL 2 when blocked by VPN
DKFZ-ODCF/ldap-summary
Simple shellscripts to make interaction with LDAP/AD/ldapsearch easier
ciccalab/SIMPLI
SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
MicheleBortol/RESOLVE_tools
Tentative set of tools and scripts for analysing spatial transcriptomic data with the resolve platform
ome/omero-py
Python project containing Ice remoting code for OMERO
GReD-Clermont/simple-omero-client
Maven project to easily connect to OMERO.
GReD-Clermont/omero-toolbox-examples
GReD-Clermont/omero_batch-plugin
German-BioImaging/RDM4mic
RDM4mic working group - research data management for microscopy data
labsyspharm/mcmicro
Multiple-choice microscopy pipeline
ciccalab/useful_commands
Notes of useful commands that might be forgotten by an average human
nextflow-io/patterns
A curated collection of Nextflow implementation patterns
BodenmillerGroup/cytomapper
R package for visualization of highly multiplexed imaging data
BodenmillerGroup/imctools
Tools to handle IMC data
nf-core/imcyto
Image Mass Cytometry analysis pipeline