/CytoCherryPick

Primary LanguageJupyter NotebookBSD 3-Clause "New" or "Revised" LicenseBSD-3-Clause

CytoCurve

Welcome to CytoCurve

CytoCurve is an opensource sowftware that provides a set of tools for the selection of representative images from a set of images.

Functions of CytoCurve

  • Image selection: CytoCurve will select a representative image from a set of images.
  • Image Distribution Analysis: Choose your own representative image and CytoCurve will graph where in the image set distribution your image is located.

Installing and Using CytoCurve

Copy the repository

$ git clone
$ cd CytoCurve

Install the CytoCurve env

$ mamba env install --file=env/env.yml
$ conda activate CytoCurve

Run CytoCurve

$ python CytoCurve.sh