Pinned Repositories
adapterremoval
AdapterRemoval v2 - rapid adapter trimming, identification, and read merging
big_text
Locate text or uncompressed files.
Bioprofile400_logger
Connect to Bioprofile400 and log the data to file
crispy
CRISPyR, Cas9 target scoring program
DamMet
disk_usage
Simple command to print disk usage stratified by user
mapDamage
mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
paleomix
Pipelines and tools for the processing of ancient and modern HTS data.
retable
Pretty printing of tabular data
MikkelSchubert's Repositories
MikkelSchubert/adapterremoval
AdapterRemoval v2 - rapid adapter trimming, identification, and read merging
MikkelSchubert/paleomix
Pipelines and tools for the processing of ancient and modern HTS data.
MikkelSchubert/retable
Pretty printing of tabular data
MikkelSchubert/big_text
Locate text or uncompressed files.
MikkelSchubert/Bioprofile400_logger
Connect to Bioprofile400 and log the data to file
MikkelSchubert/crispy
CRISPyR, Cas9 target scoring program
MikkelSchubert/DamMet
MikkelSchubert/disk_usage
Simple command to print disk usage stratified by user
MikkelSchubert/mapDamage
mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
MikkelSchubert/rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
MikkelSchubert/sickle
Windowed Adaptive Trimming for fastq files using quality
MikkelSchubert/typed-argparse
💡 write type-safe and elegant CLIs with a clear separation of concerns.
MikkelSchubert/zonkey
Reference panels for the Zonkey pipeline (paleomix)