MilagrosMarin

datajoint-tutorials

Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples

element-deeplabcut

DataJoint Element for behavioral analysis with DeepLabCut

element-moseq

DataJoint Element for Motion Sequencing with Keypoint-MoSeq

aeon_mecha

Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.

BluePyOpt

Blue Brain Python Optimisation Library

datajoint-docs

DataJoint Documentation

datajoint-python

Relational data pipelines for the science lab

datajoint-tutorials

Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples

db-programming-with-datajoint

A series of notebooks accompanying video tutorials

Multimodal-optimization-for-fitting-cerebellar-GrCs

Source code, results and analysis of the resulting population of neurons from the article 'On the use of a multimodal optimizer for fitting neuron models. Application to the cerebellar granule cell. (2021) Front. in Neuroinf.

MilagrosMarin/aeon_mecha

Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.

MilagrosMarin/BluePyOpt

Blue Brain Python Optimisation Library

MilagrosMarin/datajoint-docs

DataJoint Documentation

MilagrosMarin/datajoint-python

Relational data pipelines for the science lab

MilagrosMarin/datajoint-tutorials

Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples

MilagrosMarin/db-programming-with-datajoint

A series of notebooks accompanying video tutorials

MilagrosMarin/DeepLabCut

Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans

MilagrosMarin/element-array-ephys

DataJoint Element for Neuropixels analysis with Kilosort

MilagrosMarin/element-calcium-imaging

DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT

MilagrosMarin/element-deeplabcut

DataJoint Element for behavioral analysis with DeepLabCut

MilagrosMarin/element-electrode-localization

DataJoint Element for localizing Neuropixels electrodes

MilagrosMarin/element-miniscope

DataJoint Element for miniscope calcium imaging analysis with CaImAn

MilagrosMarin/keypoint-moseq

MilagrosMarin/microns_phase3_nda

nda schema for MICrONS phase3

MilagrosMarin/Multimodal-optimization-for-fitting-cerebellar-GrCs

Source code, results and analysis of the resulting population of neurons from the article 'On the use of a multimodal optimizer for fitting neuron models. Application to the cerebellar granule cell. (2021) Front. in Neuroinf.

MilagrosMarin/workflow-deeplabcut

Example DataJoint workflow for behavioral analysis with DeepLabCut

MilagrosMarin/element-facemap

DataJoint Element for behavioral analysis with Facemap

MilagrosMarin/element-moseq

DataJoint Element for Motion Sequencing with Keypoint-MoSeq

MilagrosMarin/MilagrosMarin

MilagrosMarin/moseq2-app

MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.