Minzhe

Bioinformatician. Computational biologist.

GeneGenieDxUS

Pinned Repositories

BaySeqPeak
Bayesian hierarchical model for analyzing methylated RNA immunoprecipitation sequencing (MeRIP-Seq) data: peak calling and differential analysis
Language:R00
BioNLP
Deep learning model to extract entity relation
Language:Python11
BOOST-GP
Bayesian mOdeling Of Spatial Transcriptomics via Gaussian Process
Language:C++5 2 12
circRNA
Large profiling of RBP-circRNA interactions from public CLIP-seq datasets
Language:R20
DeepLearning_LTV
Deep Learning Model forecasting LTV
Language:Python5 1 00
DIGREsyn
Drug Induced Genomic Residual Effect (DIGRE) model
Language:R25
drugcombination
Online tools to predict synergistic effect of drug combination
Language:PHP2 2 03
geneck
GeNeck: a online tool kit for gene network construction
Language:JavaScript30
geneck.ena
Ensemble Gene Network Construction with ENA
Language:R20
VAE_animeface
Variational autoencoder for anime face reconstruction
Language:Python21

Minzhe's Repositories

Minzhe/BOOST-GP
Bayesian mOdeling Of Spatial Transcriptomics via Gaussian Process
Language:C++5 2 12
Minzhe/DeepLearning_LTV
Deep Learning Model forecasting LTV
Language:Python5 1 00
Minzhe/geneck
GeNeck: a online tool kit for gene network construction
Language:JavaScript30
Minzhe/drugcombination
Online tools to predict synergistic effect of drug combination
Language:PHP2 2 03
Minzhe/VAE_animeface
Variational autoencoder for anime face reconstruction
Language:Python21
Minzhe/BayesianAnalysisWithPython
Bayesian Analysis With Python (PyMC3)
Language:Python1
Minzhe/BioNLP
Deep learning model to extract entity relation
Language:Python11
Minzhe/Clirc
Clirc: a user-friendly bioinformatics software to identify RBP-bound circRNAs through analysis of CLIP-Seq data
Language:Perl1
Minzhe/DIGREM-WebApp
DIGRE model web application R script
Language:R1 2 0
Minzhe/DLMed
Deep learning model to predict cancer cell drug sensitivity
Language:Python11
Minzhe/Getting-Things-Done-with-Pytorch
Jupyter Notebook tutorials on solving real-world problems with Machine Learning & Deep Learning using PyTorch. Topics: Face detection with Detectron 2, Time Series anomaly detection with LSTM Autoencoders, Object Detection with YOLO v5, Build your first Neural Network, Time Series forecasting for Coronavirus daily cases, Sentiment Analysis with BERT.
11
Minzhe/Neural-Proportional-Hazard-Model
Neural network based proportional hazard model for survival analysis
Language:Python1
Minzhe/PythonForFinance
Financial analysis with python
Language:Python1
Minzhe/BioNLP-2016
Language:Python
Minzhe/Coursera-AI-for-Medicine
Language:Jupyter Notebook
Minzhe/COVID19_ETHNIC_ANALYSIS
Language:R2 0
Minzhe/DLChem
Chemical structure fingerprint
Language:Jupyter Notebook
Minzhe/DLSyn
Language:Python
Minzhe/doubanStatistics
A web scraping tool of douban.com integrated with data analysis and visulization
Language:HTML
Minzhe/emnlp2017-relation-extraction
Context-Aware Representations for Knowledge Base Relation Extraction
Language:Python
Minzhe/gpt2-ml
GPT2 for Multiple Languages, including pretrained models. GPT2 多语言支持, 15亿参数中文预训练模型
Minzhe/JSM2018_ShortCourseMaterials
Tutorials and code for JSM 2018 short course on statistical methods for single-cell RNA-seq analysis
Language:HTML
Minzhe/KaggleDetectNuclei
2018 Data Science Bowl: Find the nuclei in divergent images to advance medical discovery
Language:Jupyter Notebook1
Minzhe/keras-resources
Directory of tutorials and open-source code repositories for working with Keras, the Python deep learning library
Minzhe/KerasDeepLearning
Language:Python
Minzhe/LeetCode
Language:Python
Minzhe/lifelines
Survival analysis in Python
Language:Python
Minzhe/minzhe.github.io
Language:HTML
Minzhe/online-cv
A minimal Jekyll Theme to host your resume (CV)
Language:CSS
Minzhe/Pokemon
Pokemon analysis
Language:Jupyter Notebook