MoTrPAC/MotrpacRatTraining6moWATData

Progress to v0.1.0

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Everything that needs to be done before v0.1.0 can be released.

DESCRIPTION

README

  • Add longer description of the purpose and contents of the package
  • Cite landscape paper
  • Link WAT manuscript once public link becomes available
  • Link to motrpacWAT package
  • Add version number badge

data-raw/

  • Create ADIPOCYTE_SIZE.R (data was created added from some other location)

data/

  • Clean up raw histology data. Include adipocyte diameter, area, and volume columns
  • Add statistical analysis of final histology data
  • Add statistical analyses of clinical analytes
  • Add VO2max and other phenotypic data
  • Add statistical analyses of phenotypic data

R/data.R

  • Document histology data
  • Document statistical analyses of histology data
  • Document statistical analyses of clinical analytes
  • Document phenotypic data
  • Document statistical analysis of phenotypic data
  • Add details to format section of PSP_KINASE_SUBSTRATE
  • Add details to WATSC_FGSEA
  • Add details to WATSC_WGCNA
  • Add details to METAB_TG_CONC
  • Describe qPCR calculations in details of MITO_DNA
  • Reference the mitochondria companion paper in MITO_DNA

GitHub Actions

  • Combine actions to reuse installation of R and dependencies

Miscellaneous

These tasks were completed sometime last year, though the issue was not updated.