Finish off configure script
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tclose commented
The configure script (in mbi-xnat branch) needs a couple of fixes to be ready for production
- make required XNAT directories in the corrected places
- ask for, then download and link the desired XNAT webapp version
- run sed over nginx-ssl.conf to replace instances of 'server_name \w+' with server_name $SITE
- ask for and set ENV variables for JVM memory limits
tclose commented
This has been implemented in master since merge of mbi-xnat