Pinned Repositories
ais-derivatives-plugin
ais-pipelines-workshop
Materials for the AIS pipelines workshop at the National Imaging Facility Annual General Meeting
arcana
Archive-centric NeuroImaging processing architecture based on NiPype
arcana-tutorial
banana
A collection of Arcana Study classes that implement neuroimaging analysis pipelines
bhg-event-materials
Brainhack Global Event Materials
Diophantine
A Python implementation of an algorithm for solving systems of diophantine equations
FouTS
A toolset written in C++ for characterising white matter tracts from dMRI using Fourier Tract Sampling (FouTS)
neurotune
tclose's Repositories
tclose/Diophantine
A Python implementation of an algorithm for solving systems of diophantine equations
tclose/ais-derivatives-plugin
tclose/ais-pipelines-workshop
Materials for the AIS pipelines workshop at the National Imaging Facility Annual General Meeting
tclose/bhg-event-materials
Brainhack Global Event Materials
tclose/bhg-subcortical-rnn
Collection of scripts, maybe forming into a reusable package for modelling
tclose/dev-tools-train-track
Instructions for the Development tools (VS Code) train track
tclose/docker-images
Dockerfiles and metadata for XNAT's container service
tclose/fileformats-datascience-extras
Implements extra features for interacting with file formats defined in the fileformats-datascience package
tclose/fileformats-extras
Extras for file-format classes in the fileformats package
tclose/fileformats-extras-template
A template repository for adding "extras" functionality to fileformats classes
tclose/fileformats-medimage-extras
Extras for file-format classes in the fileformats-medimage sub-package
tclose/fileformats-mrtrix
tclose/global2021
tclose/icpu
Some scripts for collating and scaling ICPU grades
tclose/mrtrix3
MRtrix provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density
tclose/neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
tclose/nif-reporting
Scripts to aid NIF reporting
tclose/nipype
Workflows and interfaces for neuroimaging packages
tclose/pydra
Pydra Dataflow Engine
tclose/pydra-ants
tclose/pydra-ants-autodemo
tclose/pydra-dcm2niix
Pydra task interface for Dcm2niix DICOM to NIfTI conversion utility
tclose/pydra-ml
tclose/pydra-mrtrix3
tclose/pydra-nixutils
A collection of Pydra task interfaces for common *nix utilities
tclose/pydra-tutorial
Pydra tutorial
tclose/pyFouTS
Python implementation of Fourier Tract Sampling dMRI tractography model
tclose/pytest-timeout-pass
Pytest plugin to initialise long-running processes and then kill them after the initialisation has finished and mark them as passed
tclose/sublime_sphinx_guide
Sublime and Sphinx Guide
tclose/tclose
My personal repository