A general overview on how to install the software and how to use it can be found here: https://wiki.mouseimaging.ca/display/MICePub/Generating+deformation+fields More information to come (contact: matthijs(at)mouseimaging(dot)ca)
Mouse-Imaging-Centre/generate_deformation_fields
Given an input Jacobian determinant, this code will generate a deformation field that produces that Jacobian field. (Made for MINC format files)
PythonNOASSERTION