Problem with cellpose-napari (logger import error)

[camcaminin9]

Hello! I am trying to get to work cellpose-napari. I am using a mac with M1 Chip, with anaconda3. I created a new environment following the instructions given on the documentation (https://napari.org/).
conda create -y -n napari-env python=3.8
conda activate napari-env
pip install "napari[all]"
Napari opened correctly, then I installed cellpose-napari internally.

Once I load an image and try to run a segmentation, I get this error message:

I tried with both python 3.8 and 3.9, but the same happens. Do you maybe have an idea of what is causing this problem and how to solve it?
Thank you very much
Camilla

[tlambert03]

Hi @camcaminin9, I noticed this as well. see #20

try downgrading cellpose for now: pip install cellpose==0.6.5

[camcaminin9]

Yes just saw it, indeed. Cellpose alone works fine with me, but I would like to use the Napari Widget

[tlambert03]

the napari widget should also work if you downgrade cellpose to < 0.7. The point is, this widget was designed for <= 0.6.5, the upstream library made some changes in the meantime, and this plugin hasn't yet been updated. so, you can use this widget, but only with older versions of the core cellpose library

[camcaminin9]

Thank you very much. Indeed it is solved in this way

[tlambert03]

fixed by #29, in newest release